Nothing is better than a fresh, hot bagel. But when you are on the keto diet, they aren’t an option. This recipe makes Keto Air Fryer Bagels that taste incredible and will be your new go-to breakfast idea!

Crackly on the outside, chewy and bread-soft on the inside — these air fryer keto bagels deliver everything a real bagel does, with just 5 grams of net carbs each. Five pantry ingredients, twenty minutes, zero guilt — and they’re so good even the carb-eaters in your house will steal one.
If you’ve been on keto for more than a week, you know the bread cravings hit hard. These air fryer keto bagels are the answer. Made from classic fathead dough — shredded mozzarella, almond flour, cream cheese, and eggs — they crisp up in the air fryer in about 10 minutes and taste shockingly close to the New York deli original. At 5g net carbs and 17g protein per bagel, they fit clean into a keto, low-carb, or gluten-free diet without the almond-flour sandiness that ruins so many homemade versions.
Compared to two-ingredient Greek yogurt bagels, the fathead method gives you a more authentic chew and a longer shelf life — they hold up beautifully for a week in the fridge or three months in the freezer.
Keto Bagel vs Regular Bagel (Carb Comparison)
| Per bagel | Air Fryer Keto Bagel | Plain Bakery Bagel |
|---|---|---|
| Net carbs | 5 g | 48 g |
| Protein | 17 g | 10 g |
| Fat | 35 g | 1.5 g |
| Fiber | 4 g | 2 g |
| Gluten | None | Yes |

Why You’ll Love These Air Fryer Keto Bagels
- 5g net carbs each — fits in a strict 20g/day keto window.
- 20 minutes start to finish — faster than driving to the bakery.
- 5 ingredients, all keto pantry staples.
- Real bread chew — fathead dough is the closest keto bread comes to the real thing.
- Freezer-friendly — batch 12, toast straight from frozen.
- Naturally gluten-free and grain-free.
Ingredients for Air Fryer Keto Bagels

- Shredded mozzarella cheese: Low-moisture, part-skim works best.
- Cream cheese: Full-fat, softened, adds tang and moisture.
- Almond flour: NOT almond meal; superfine gives smooth texture.
- Baking powder: For lift.
- Apple cider vinegar: Activates the baking powder, deepens chew.
- Large egg: Room temperature.
- Melted butter: For brushing the tops.
- Optional: everything bagel seasoning, sesame seeds, poppy seeds, or coarse salt.
How to Make Air Fryer Keto Bagels (Step-by-Step)

Step 1 — Melt the cheeses. In a large microwave-safe bowl, combine the shredded mozzarella and cream cheese. Microwave in 30-second bursts, stirring between each, until completely melted and stretchy — about 90 seconds total. Don’t skip the stirring; uneven melting is the #1 cause of grainy fathead dough.
Step 2 — Add the dry ingredients. Working quickly while the cheese is still hot, add the almond flour, baking powder, vinegar, and egg. Mix with a silicone spatula until a sticky, uniform dough forms. If it cools and seizes, pop it back in the microwave for 15 seconds.

Step 3 — Cool and divide the dough. Let the dough rest 3–4 minutes until cool enough to handle. Divide into 6 equal portions (about 2.5 oz each) — a kitchen scale gives you bagels that cook evenly.

Step 4 — Shape the bagels. Roll each portion into a 6-inch rope on a parchment-lined surface, then pinch the ends together to form a ring. Smooth the seam with wet fingertips. Wet hands are the secret to clean shapes — dry hands fight the dough.
Step 5 — Preheat and prep the basket. Preheat your air fryer to 350°F (175°C). Line the basket with a perforated parchment round or spray lightly with avocado oil. Don’t crowd — leave ½ inch between bagels for airflow.

Step 6 — Brush and season. Brush each bagel generously with melted butter. Sprinkle with everything bagel seasoning, sesame seeds, or coarse salt while the butter is still wet so the toppings stick.
Step 7 — First air fry (5 minutes). Air fry at 350°F for 5 minutes. Open the basket — the tops should be just starting to color.
Step 8 — Flip and brush again. Carefully flip each bagel with tongs, brush the other side with the remaining melted butter, and add more seasoning if desired.
Step 9 — Finish air frying (5–7 minutes). Air fry for another 5–7 minutes until deeply golden brown and firm to the touch. Internal temp should hit 200°F if you want to be precise.
Step 10 — Cool and serve. Transfer to a wire rack and cool for at least 5 minutes — they continue to set as they cool, and cutting too early gives you gummy centers. Slice horizontally, toast, and load with cream cheese, smoked salmon, or your favorite keto sandwich fillings.

Pro Tips for the Perfect Keto Bagel
- Use fine almond flour, not almond meal — meal makes the bagels sandy.
- Pre-shred your own mozzarella. Bagged shredded cheese has cornstarch coating that throws off the moisture balance.
- Don’t skip the vinegar. One teaspoon reacts with the baking powder and is what gives the bagels their chew.
- Weigh your dough portions for bagels that finish at the same time.
- If the dough sticks to your hands, oil your palms with a drop of olive oil.
Variations
- Everything bagels: Coat tops with everything bagel seasoning.
- Jalapeño cheddar: Fold ¼ cup diced pickled jalapeños and ½ cup shredded cheddar into the dough.
- Cinnamon “sugar”: Mix 2 Tbsp powdered allulose with 1 tsp cinnamon and dust the buttered tops.
- Asiago: Sprinkle shredded asiago on top during the last 3 minutes of cooking.
Storage & Reheating
- Counter: up to 24 hours in an airtight container.
- Fridge: up to 7 days, wrapped.
- Freezer: slice in half, freeze flat, then bag. Lasts 3 months.
- Reheat: toast straight from frozen for the best texture, or air fry at 325°F for 2–3 minutes.

Air Fryer Keto Bagels FAQ
How many carbs are in air fryer keto bagels? Each air fryer keto bagel has 5 grams of net carbs (9g total carbs minus 4g fiber). That fits comfortably into a standard 20g/day keto diet, leaving room for vegetables and other foods throughout the day.
Are fathead bagels actually keto? Yes. Fathead bagels are keto because they replace high-carb wheat flour with almond flour and mozzarella, dropping net carbs from ~48g (regular bagel) to ~5g per bagel. They’re high in fat and protein, the macros keto requires.
Can I make air fryer keto bagels without almond flour? Yes, but adjust. Coconut flour works at ⅓ the volume (use ¾ cup coconut flour instead of 2 cups almond flour) plus 2 extra eggs to compensate for absorption. Sunflower seed flour swaps 1:1 for a nut-free version.
Why are my keto bagels rubbery? Rubbery keto bagels come from overworking the dough or undercooking. Mix only until the dough is uniform, and cook the full 10–12 minutes until the tops are deeply golden — not just pale tan.
Can I make these in the oven instead of the air fryer? Yes. Bake on a parchment-lined sheet at 400°F (205°C) for 12–15 minutes, flipping halfway. The air fryer gives a crisper exterior, but the oven works fine.
How do I keep the dough from sticking to my hands? Wet your hands with cold water before shaping each bagel, or rub a drop of olive oil between your palms. Fathead dough is sticky by nature — wet hands are the fix used by every keto baker.

More Easy Air Fryer Recipes
- AIR FRYER, SEASONED FRYER CHICKEN (KETO FRIENDLY)
- EASY AIR FRYER, FRENCH ONION CHICKEN BREAST WITH FONTINA CHEESE
- AIR FRYER, RIB EYE WITH GARLIC & BASIL BUTTER (KETO FRIENDLY)
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Air Fryer Keto Bagels
Description
Ingredients
- 2 cups shredded mozzarella cheese, low-moisture, part-skim
- 2 oz cream cheese, softened
- 2 cups fine almond flour
- 1½ tsp baking powder
- 1 tsp apple cider vinegar
- 1 large egg, room temperature
- 2 Tbsp butter, melted (for brushing)
- Optional: everything bagel seasoning, sesame seeds, poppy seeds, or coarse salt
Instructions
- Melt the cheeses. Combine mozzarella and cream cheese in a large microwave-safe bowl. Microwave in 30-second bursts, stirring between each, until fully melted and stretchy (about 90 seconds total).
- Mix the dough. Working quickly while the cheese is hot, add almond flour, baking powder, vinegar, and egg. Stir with a silicone spatula until a uniform sticky dough forms.
- Rest and divide. Let the dough cool 3–4 minutes, then divide into 6 equal portions (about 2.5 oz each).
- Shape. Roll each portion into a 6-inch rope, pinch the ends together to form a ring, and smooth the seam with wet fingertips.
- Preheat. Preheat air fryer to 350°F (175°C). Line basket with perforated parchment or spray lightly with oil.
- Brush and season. Brush bagels with melted butter and sprinkle with everything seasoning, sesame seeds, or coarse salt while butter is still wet.
- First fry. Air fry at 350°F for 5 minutes.
- Flip. Flip bagels with tongs, brush other side with remaining butter.
- Finish frying. Air fry another 5–7 minutes until deeply golden brown and firm to the touch (internal temp 200°F).
- Cool and serve. Transfer to a wire rack and cool at least 5 minutes before slicing. Serve with cream cheese, butter, or smoked salmon.
Equipment
- Cooking Spray, or Parchment Paper
Notes
Notes
- Almond flour matters: Use fine or superfine almond flour, never almond meal — meal gives a sandy texture.
- Pre-shred your mozzarella. Bagged shredded cheese contains anti-caking starch that throws off moisture.
- Don’t skip the vinegar. It activates the baking powder and is what gives these bagels real bagel chew.
- Storage: Counter 24 hours, fridge 7 days, freezer 3 months. Slice before freezing for easy toasting.
- Reheat: Toast directly from frozen, or air fry at 325°F for 2–3 minutes.
Nutrition
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Jamie
Thank you so much for this recipe! I was honestly not expecting these to turn out as well as they did! I dipped the hot bagels in sesame seeds, everything seasoning and Trader Joe’s black garlic crystals – they are divine with just a smear of butter. A+!